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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_5BL_4DD00FF4B.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 133aa MW: 14839.7 Da PI: 10.9835 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.7 | 5e-13 | 62 | 114 | 1 | 53 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 e++++r+rrk +NR++A+rsR+RK++++eeL+ v+ + ae ++L+ +l + Traes_5BL_4DD00FF4B.1 62 EERRRRQRRKVSNRLSAQRSRARKQQRLEELRGTVARFRAEKRDLAAKLHTVA 114 6889******************************************9998765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.2E-8 | 59 | 113 | No hit | No description |
SMART | SM00338 | 5.3E-7 | 60 | 126 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.2E-9 | 62 | 114 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.117 | 64 | 127 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-8 | 66 | 114 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 69 | 84 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 9.34E-9 | 71 | 116 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MLSLQEAIGL DMDAMTSGFG FTPWEADTCP TLEELMAASS TSSPSSSGGA VADQAGMVED 60 EEERRRRQRR KVSNRLSAQR SRARKQQRLE ELRGTVARFR AEKRDLAAKL HTVARHELAV 120 RRQNARLRAE AAV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008665488.1 | 1e-36 | PREDICTED: ocs element-binding factor 1-like | ||||
TrEMBL | W5FB27 | 8e-91 | W5FB27_WHEAT; Uncharacterized protein | ||||
STRING | MLOC_38843.1 | 1e-57 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13845 | 24 | 29 |
Publications ? help Back to Top | |||
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